Mastouille

Guillaume LouvelChanges to NCBI taxonomy (march 2025):- new ranks, - updated classifications<a href="https://ncbiinsights.ncbi.nlm.nih.gov/2024/06/04/changes-ncbi-taxonomy-classifications/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://ncbiinsights.ncbi.nlm.nih.gov/2024/06/04/changes-ncbi-taxonomy-classifications/</a><a href="https://ecoevo.social/tags/Phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenetics</a> <a href="https://ecoevo.social/tags/Taxonomy" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Taxonomy</a>

Molecular Biology & EvolutionSatuTe by Manuel et al. is a new tool to quantify phylogenetic signal and saturation between subtrees. Applied to the Tree of Life, SatuTe shows that most ribosomal proteins support a eukaryotic clade.🔗 doi.org/10.1093/molbev/msaf090<a href="https://ecoevo.social/tags/evolbio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#evolbio</a> <a href="https://ecoevo.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> <a href="https://ecoevo.social/tags/compbio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#compbio</a>

UK<a href="https://www.europesays.com/uk/127022/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.europesays.com/uk/127022/</a> Host associations and genetic diversity of bat flies (Diptera: Nycteribiidae and Streblidae) in bats from Thailand | Parasites & Vectors <a href="https://pubeurope.com/tags/BatFlies" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#BatFlies</a> <a href="https://pubeurope.com/tags/Entomology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Entomology</a> <a href="https://pubeurope.com/tags/Genetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Genetics</a> <a href="https://pubeurope.com/tags/HostVectorInteraction" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#HostVectorInteraction</a> <a href="https://pubeurope.com/tags/InfectiousDiseases" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#InfectiousDiseases</a> <a href="https://pubeurope.com/tags/Parasitology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Parasitology</a> <a href="https://pubeurope.com/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> <a href="https://pubeurope.com/tags/Science" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Science</a> <a href="https://pubeurope.com/tags/SpeciesDelimitation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#SpeciesDelimitation</a> <a href="https://pubeurope.com/tags/Thailand" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Thailand</a> <a href="https://pubeurope.com/tags/TropicalMedicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#TropicalMedicine</a> <a href="https://pubeurope.com/tags/UK" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#UK</a> <a href="https://pubeurope.com/tags/UnitedKingdom" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#UnitedKingdom</a> <a href="https://pubeurope.com/tags/VeterinaryMedicine" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#VeterinaryMedicine</a>/VeterinaryScience <a href="https://pubeurope.com/tags/Virology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Virology</a>

Molecular Biology & Evolution🐿️ SQUIRREL is a fast, consistent algorithm for inferring phylogenetic networks from sequence data. It can capture reticulate evolution more accurately than trees. New Methods paper in MBE by Holtgrefe et al.🔗 <a href="https://doi.org/10.1093/molbev/msaf067" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.1093/molbev/msaf067</a><a href="https://ecoevo.social/tags/evobio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#evobio</a> <a href="https://ecoevo.social/tags/molbio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#molbio</a> <a href="https://ecoevo.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> <a href="https://ecoevo.social/tags/squirrel" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#squirrel</a>

Molecular Biology & EvolutionPhyloformer by Nesterenko et al. is a deep learning method for phylogenetic inference that estimates evolutionary trees directly from sequence alignments, often outperforming traditional methods in speed and accuracy.@laurentjacob.bsky.social🔗 <a href="https://doi.org/10.1093/molbev/msaf051" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.1093/molbev/msaf051</a><a href="https://ecoevo.social/tags/evobio" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#evobio</a> <a href="https://ecoevo.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a>

Giuseppe MichieliAnalyses of <a href="https://mstdn.science/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a>, natural <a href="https://mstdn.science/tags/selection" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#selection</a>, and <a href="https://mstdn.science/tags/protein" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#protein</a> structure of clade 2.3.4.4b <a href="https://mstdn.science/tags/H5N1" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#H5N1</a> <a href="https://mstdn.science/tags/Influenza" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Influenza</a> A reveal that recent viral lineages have evolved promiscuity ..., <a href="https://etidiohnew.blogspot.com/2025/03/analyses-of-phylogenetics-natural.html" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://etidiohnew.blogspot.com/2025/03/analyses-of-phylogenetics-natural.html</a>

SIB Swiss BioinformaticsPhyloSIB, our annual workshop about molecular evolution, phylogenetics, and comparative phylogenomics took place Wednesday in Lausanne as a satellite event preceding Biology25.15 SIB Groups gave presentations on recent developments in the field. We had a full house with 80 participants. A lively and fruitful open discussion forum concluded the workshop.<a href="https://mstdn.science/@richardneher" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@richardneher</a>, <a href="https://ecoevo.social/@marcrr" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@marcrr</a>, <a href="https://mstdn.science/@dessimoz" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@dessimoz</a>, <a href="https://mstdn.science/@mariedangles" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@mariedangles</a>, <a href="https://ecoevo.social/@rmwaterhouse" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@rmwaterhouse</a> <a href="https://mstdn.science/tags/PhyloSIB" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#PhyloSIB</a> <a href="https://mstdn.science/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://mstdn.science/tags/Phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenetics</a> <a href="https://mstdn.science/tags/Phylogenomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenomics</a> <a href="https://mstdn.science/tags/Biology25" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Biology25</a>

juli g pausasLet's see the magic of <a href="https://mastodon.social/@Mastodon" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@Mastodon</a> Is there a way to plot a dated phylogeny with a log-scale time axis? If possible, using R <a href="https://fediscience.org/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> <a href="https://fediscience.org/tags/phylo" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylo</a> <a href="https://fediscience.org/tags/rstats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#rstats</a> <a href="https://a.gup.pe/u/rstats" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@rstats</a> <a href="https://a.gup.pe/u/ecology" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@ecology</a> <a href="https://a.gup.pe/u/plants" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@plants</a> <a href="https://a.gup.pe/u/botany" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@botany</a> <a href="https://a.gup.pe/u/plantscience" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@plantscience</a> <a href="https://a.gup.pe/u/nature" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@nature</a> <a href="https://a.gup.pe/u/biodiversity" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@biodiversity</a> <a href="https://a.gup.pe/u/evolution" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@evolution</a>

The Inquisitive BiologistNew review: How is the living world organized and classified? Encyclopaedic in scope yet compelling to read, the deeply researched Kingdoms, Empires, & Domains is an 851-page behemoth that surveys 26 centuries of our changing understanding. <a href="https://inquisitivebiologist.com/2025/01/17/book-review-kingdoms-empires-domains-the-history-of-high-level-biological-classification/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://inquisitivebiologist.com/2025/01/17/book-review-kingdoms-empires-domains-the-history-of-high-level-biological-classification/</a><a href="https://scicomm.xyz/tags/Books" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Books</a> <a href="https://scicomm.xyz/tags/BookReview" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#BookReview</a> <a href="https://scicomm.xyz/tags/Bookstodon" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bookstodon</a> <a href="https://scicomm.xyz/tags/Scicomm" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Scicomm</a> <a href="https://scicomm.xyz/tags/Classification" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Classification</a> <a href="https://scicomm.xyz/tags/Genetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Genetics</a> <a href="https://scicomm.xyz/tags/HistoryOfScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#HistoryOfScience</a> <a href="https://scicomm.xyz/tags/ScienceHistory" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ScienceHistory</a> <a href="https://scicomm.xyz/tags/HistSci" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#HistSci</a> <a href="https://scicomm.xyz/tags/Microbiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Microbiology</a> <a href="https://scicomm.xyz/tags/Phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenetics</a> <a href="https://scicomm.xyz/tags/ScalaNaturae" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ScalaNaturae</a> <a href="https://scicomm.xyz/tags/Taxonomy" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Taxonomy</a> <a href="https://scicomm.xyz/tags/Zoophyta" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Zoophyta</a> <a href="https://a.gup.pe/u/bookstodon" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@bookstodon</a>

Annals of Botany🌐 Understanding the evolution of orchids is essential for uncovering the secrets behind their incredible diversification and ecological success across the globe. (8/8) 👉 <a href="https://doi.org/nzqf" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/nzqf</a><a href="https://botany.social/tags/OrchidEvolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#OrchidEvolution</a> <a href="https://botany.social/tags/PlantScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#PlantScience</a> <a href="https://botany.social/tags/Botany" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Botany</a> <a href="https://botany.social/tags/Orchids" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Orchids</a> <a href="https://botany.social/tags/Phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenetics</a> <a href="https://botany.social/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Genomics</a> <a href="https://botany.social/tags/Ecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Ecology</a> <a href="https://botany.social/tags/PlantDiversification" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#PlantDiversification</a>

PLOS BiologyUnifying statistical <a href="https://fediscience.org/tags/genetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#genetics</a> & <a href="https://fediscience.org/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a>. @jgschraiber @DocEdge85 & @mwpen show that the distinct ways of mapping phenotypes while controlling for ancestry in these two fields are actually special cases of the same general approach <a href="https://fediscience.org/tags/PLOSBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#PLOSBiology</a> <a href="https://plos.io/4eZvKiv" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://plos.io/4eZvKiv</a>

Marc Robinson-RechaviInteresting result, and I'm surprised no one showed it earlier (apparently?): the apparent increase in evolutionary rates over short time scales can be entirely explained by noise, with randomised data providing identical results to the original datasets 😮 <a href="https://www.biorxiv.org/content/10.1101/2024.02.29.582777v4" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.biorxiv.org/content/10.1101/2024.02.29.582777v4</a> <a href="https://ecoevo.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> <a href="https://ecoevo.social/tags/EvolutionaryBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#EvolutionaryBiology</a> <a href="https://ecoevo.social/tags/MethodsMatter" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#MethodsMatter</a>

Joanna MaselI'm hiring a <a href="https://ecoevo.social/tags/postdoc" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#postdoc</a>, for <a href="https://ecoevo.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a> work on amino acid substitution models. I think they are key for understanding biophysics of selection on <a href="https://ecoevo.social/tags/proteins" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#proteins</a>, <a href="https://ecoevo.social/tags/mutation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#mutation</a> patterns, and <a href="https://ecoevo.social/tags/AncientLife" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#AncientLife</a>, as well as improving <a href="https://ecoevo.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> methods. <a href="https://evol.mcmaster.ca/brian/evoldir/PostDocs//UArizona.AminoAcidSubstitutionModels" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://evol.mcmaster.ca/brian/evoldir/PostDocs//UArizona.AminoAcidSubstitutionModels</a> <a href="https://ecoevo.social/tags/ScienceJobs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ScienceJobs</a> <a href="https://ecoevo.social/tags/evolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#evolution</a> <a href="https://a.gup.pe/u/jobsecoevo" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@jobsecoevo</a>

Marc Robinson-RechaviUpdated preprint of work by Tina Begum et al showing that paralogs from small-scale duplications have jumps in expression phenotype, much more than orthologs or whole genome duplication paralogs <a href="https://www.biorxiv.org/content/10.1101/2023.12.29.571877v2" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.biorxiv.org/content/10.1101/2023.12.29.571877v2</a> <a href="https://ecoevo.social/tags/ortholog" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ortholog</a> <a href="https://ecoevo.social/tags/paralog" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#paralog</a> <a href="https://ecoevo.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> <a href="https://ecoevo.social/tags/GeneExpression" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#GeneExpression</a> <a href="https://ecoevo.social/tags/MolecularEvolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#MolecularEvolution</a> <a href="https://ecoevo.social/tags/FishEvolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#FishEvolution</a>

Felix VauxStill so much undescribed oyster diversity in Australia!Molecular identification of intertidal rock oyster species in north-eastern Australia reveals new candidates for aquaculture: <a href="https://doi.org/10.1016/j.aquaculture.2024.740838" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.1016/j.aquaculture.2024.740838</a><a href="https://mastodon.social/tags/evolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#evolution</a> <a href="https://mastodon.social/tags/ecology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ecology</a> <a href="https://mastodon.social/tags/species" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#species</a> <a href="https://mastodon.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> <a href="https://mastodon.social/tags/genetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#genetics</a>

naturepokerLooking for some suggestions - I'm working with Archaeal genomic regions whose optimally fitting model seems to be Tamura-Nei (<a href="https://doi.org/10.1093/oxfordjournals.molbev.a040023" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://doi.org/10.1093/oxfordjournals.molbev.a040023</a>). Would it be too much to suspect the Archaeal region is under similar types of evolutionary pressure? <a href="https://genomic.social/tags/archaea" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#archaea</a> <a href="https://genomic.social/tags/microbiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#microbiology</a> <a href="https://genomic.social/tags/evolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#evolution</a> <a href="https://genomic.social/tags/phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#phylogenetics</a> <a href="https://genomic.social/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#bioinformatics</a>

@Co_BiologistsEarly-bird deadline is Friday 19 January for Journal of Cell Science 2024 Journal Meeting 'Diversity and Evolution in Cell Biology' organised by Gautam Dey, Lillian Fritz-Laylin, Snezhka Oliferenko, Meg Titus & Michael Way. Apply to attend at <a href="https://www.biologists.com/meetings/jcsevocellbio24/" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.biologists.com/meetings/jcsevocellbio24/</a> <a href="https://biologists.social/tags/cellbiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#cellbiology</a> <a href="https://biologists.social/tags/evolutionarybiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#evolutionarybiology</a> <a href="https://biologists.social/tags/comparativebiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#comparativebiology</a> <a href="https://biologists.social/tags/Phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenetics</a> <a href="https://biologists.social/tags/imaging" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#imaging</a> <a href="https://biologists.social/tags/microscopy" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#microscopy</a> <a href="https://biologists.social/tags/geneticengineering" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#geneticengineering</a> <a href="https://biologists.social/@gautamdey" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@gautamdey</a> <a href="https://mstdn.science/@WallaceUCSF" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@WallaceUCSF</a> <a href="https://mstdn.social/@DudinLab" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@DudinLab</a> <a href="https://sciencemastodon.com/@thattai" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@thattai</a> <a href="https://mstdn.science/@BungoAkiyoshi" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@BungoAkiyoshi</a>

eLifeA fossil from the <a href="https://fediscience.org/tags/Triassic" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Triassic</a> shed light on the emergence and evolution of marine reptiles following a major <a href="https://fediscience.org/tags/extinction" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#extinction</a> event. The armoured marine reptile, Prosaurosphargis yingzishanensis, is depicted in this life reconstruction. <a href="https://fediscience.org/tags/Paleontology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Paleontology</a> <a href="https://fediscience.org/tags/Phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenetics</a> <a href="https://fediscience.org/tags/12DaysOfeLife" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#12DaysOfeLife</a> <a href="https://elifesciences.org/articles/83163?utm_source=mastodon&utm_medium=social&utm_campaign=organic_12Days" rel="nofollow noopener noreferrer" target="_blank">https://elifesciences.org/articles/83163?utm_source=mastodon&utm_medium=social&utm_campaign=organic_12Days</a>

SIB Swiss BioinformaticsLooking for a way to sidestep the costs of generating phylogenetic trees? In this <a href="https://mstdn.science/tags/insilicotalk" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#insilicotalk</a>, David Dylus introduces <a href="https://mstdn.science/tags/Read2Tree" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Read2Tree</a>, a tool developed within the group of <a href="https://mstdn.science/@dessimoz" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@dessimoz</a> which enables rapid inference of phylogenetic trees from raw sequencing reads. If you're passionate about comparative genomics and eager to learn how to construct phylogenetic trees efficiently, this is a must-watch! 👉 <a href="https://www.sib.swiss/in-silico-talks/read2tree-inferring-phylogenetic-trees-from-raw-sequencing-data" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://www.sib.swiss/in-silico-talks/read2tree-inferring-phylogenetic-trees-from-raw-sequencing-data</a> <a href="https://mstdn.science/tags/Phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenetics</a> <a href="https://mstdn.science/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Genomics</a> <a href="https://mstdn.science/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Bioinformatics</a> <a href="https://mstdn.science/tags/ComputationalBiology" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#ComputationalBiology</a>

Brian O'MearaI'm seeking grad students this round of admissions: see more at <a href="https://brianomeara.info/opportunities.html#grad-students" rel="nofollow noopener noreferrer" translate="no" target="_blank">https://brianomeara.info/opportunities.html#grad-students</a> . Like other good ecology and evolutionary biology programs, students making adequate progress are fully funded (through TA lines), we practice holistic admissions, and students are in a community. Some of the topics folks in my lab have worked on:<a href="https://mastodon.social/tags/Phylogenetics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Phylogenetics</a> <a href="https://mastodon.social/tags/Evolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Evolution</a> <a href="https://mastodon.social/tags/Conservation" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Conservation</a> <a href="https://mastodon.social/tags/Systematics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Systematics</a> <a href="https://mastodon.social/tags/TraitEvolution" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#TraitEvolution</a> <a href="https://mastodon.social/tags/Diversification" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Diversification</a> <a href="https://mastodon.social/tags/Dating" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Dating</a> <a href="https://mastodon.social/tags/Fish" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Fish</a>, <a href="https://mastodon.social/tags/Birds" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Birds</a>, <a href="https://mastodon.social/tags/Insects" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Insects</a>, <a href="https://mastodon.social/tags/Plants" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#Plants</a>, and more

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