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Bioconductor<p>🎓🌍 Bioconductor Kenya Course Kickoff! 🎉 Our first Bioconductor course in Africa started in Nairobi! Day 1 featured learning and collaboration with Laurent Gatto, and Michael Landi. Sessions later this week by Fabricio Almeida-Silva, Laurah Ondari, and Zedias Chikwambi. Thanks to CZI and UL Global for funding. <br><a href="https://genomic.social/tags/Bioconductor" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioconductor</span></a> <a href="https://genomic.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioinformatics</span></a> <a href="https://genomic.social/tags/RProgramming" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RProgramming</span></a> <a href="https://genomic.social/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://genomic.social/tags/Africa" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Africa</span></a></p>
The Carpentries<p>A reminder about today's and tomorrow's Community Development Program Quarterly meetings at 14:00 UTC today, and 02:00 UTC tomorrow. We will discuss AI/LLMs and The Carpentries. </p><p>We look forward to connecting with you, sharing updates, and exploring opportunities within our global community: <a href="https://carpentries.org/community/events/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/community/even</span><span class="invisible">ts/</span></a></p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/AI" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>AI</span></a> <a href="https://hachyderm.io/tags/LLMs" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>LLMs</span></a></p>
ZB MED<p>💡 Wie kann dir ZB MED helfen, deine Datenkompetenz zu steigern?<br>Durch die Carpentry-Workshops, die wir bei ZB MED anbieten!</p><p>🔍 Aber was sind die Carpentries eigentlich?<br>Die Carpentries sind eine globale Community, die Forschende und Lehrende in Programmier- und Datenfähigkeiten schult.</p><p>📩 Keinen Workshop mehr verpassen?<br>Melde dich jetzt zu unserem Trainings-Newsletter an! 👉 zbmed.de/newsletter-trainings</p><p><a href="https://mastodon.social/tags/Datenkompetenz" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Datenkompetenz</span></a> <a href="https://mastodon.social/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://mastodon.social/tags/ZBMED" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>ZBMED</span></a> <a href="https://mastodon.social/tags/Coding" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Coding</span></a> <a href="https://mastodon.social/tags/OpenScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>OpenScience</span></a></p>
The Carpentries<p>🚨 Important Updates for Self-Organised Workshops (SOWs) 🚨</p><p>We're making a few changes to support the sustainability of our Self-Organised Workshops! </p><p>1. Due to rising costs, AWS instances used in Data Carpentry Genomics workshops will now have a fee.</p><p>2. Updated SOW Definition &amp; Submission Guidelines.</p><p>We understand that these changes are significant, and our goal is to continue sustainably providing support moving forward. </p><p>Full details can be found in today's blog post: <a href="https://carpentries.org/blog/2025/02/changes-to-self-organised-workshops/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2025/02/c</span><span class="invisible">hanges-to-self-organised-workshops/</span></a></p><p>As always, we are available for questions, concerns, and feedback. Please email team@carpentries.org.</p><p>Thank you for your continued support—your impact is invaluable!</p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/TheCarpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>TheCarpentries</span></a> <a href="https://hachyderm.io/tags/SelfOrganisedWorkshops" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SelfOrganisedWorkshops</span></a> <a href="https://hachyderm.io/tags/CarpentriesWorkshops" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentriesWorkshops</span></a> <a href="https://hachyderm.io/tags/Genomics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Genomics</span></a> <a href="https://hachyderm.io/tags/DataCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>DataCarpentry</span></a> <a href="https://hachyderm.io/tags/CarpentriesCommunity" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentriesCommunity</span></a></p>
The Carpentries<p>📢 The Carpentries Board of Directors has released the 2024 Yearly Report! 🎉</p><p>This report reflects on our progress, celebrates key achievements, and highlights our commitment to fostering accessible, inclusive, and sustainable communities in data and computational training.</p><p>🌟 Check out the report and join us in shaping the future of The Carpentries!<br>👉 <a href="https://github.com/carpentries/governance/blob/main/year-in-review/board-yearly-report-2024.md" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">github.com/carpentries/governa</span><span class="invisible">nce/blob/main/year-in-review/board-yearly-report-2024.md</span></a><br><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/CarpentriesGovernance" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentriesGovernance</span></a></p>
Bioconductor<p>🌍 Bioconductor Course, Kenya 2025 🎓</p><p>We’re thrilled to announce our first in-person Bioconductor course in Kenya, happening March 24–28, 2025, at the ILRI Campus in Nairobi!</p><p>This free, week-long course is for bioinformatics beginners, covering R, Bioconductor, and RNA-seq workflows, and aims to grow the Bioconductor community in Africa.</p><p>🔗 Apply now: <a href="https://buff.ly/40CJL02" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">buff.ly/40CJL02</span><span class="invisible"></span></a><br>🔗 Learn more: <a href="https://training.bioconductor.org/workshops/2025-03-Nairobi/index.html" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">training.bioconductor.org/work</span><span class="invisible">shops/2025-03-Nairobi/index.html</span></a> </p><p><a href="https://genomic.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioinformatics</span></a> <a href="https://genomic.social/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://genomic.social/tags/RStats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RStats</span></a> <a href="https://genomic.social/tags/RNAseq" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RNAseq</span></a></p>
The Carpentries<p>📢 Today we relaunched The Carpentries’ main website and its Lesson Programs websites! 🎉 </p><p>Updates to the sites have been in process for some time, and we are pleased to finally share the outcomes of all that work with you. We invite any feedback you may have as we continue to improve these websites.</p><p>Find out about the changes we made, and explore the new websites linked in this relaunch announcement: <a href="https://carpentries.org/blog/2024/11/the-carpentries-websites-relaunched/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2024/11/t</span><span class="invisible">he-carpentries-websites-relaunched/</span></a></p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/SoftwareCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SoftwareCarpentry</span></a> <a href="https://hachyderm.io/tags/DataCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>DataCarpentry</span></a> <a href="https://hachyderm.io/tags/LibraryCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>LibraryCarpentry</span></a></p>
Jannetta<p>CarpentryConnect Heidelberg 2024 came to an end today. I'm happy to go home but sad to have to say goodbye to all the lovely people from the Carpentries community. It was so amazing to meet many of you for the first time in person and also to see others in person again. <br><a href="https://hachyderm.io/tags/thecarpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>thecarpentries</span></a> <a href="https://hachyderm.io/tags/cchb24" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>cchb24</span></a> <a href="https://hachyderm.io/tags/CarpentryConnect" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentryConnect</span></a> <a href="https://hachyderm.io/tags/carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>carpentries</span></a></p>
Heidi Seibold<p>Rhadika Khetani gave a wonderful keynote at <a href="https://fosstodon.org/tags/BioNTCCHD2024" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BioNTCCHD2024</span></a> about training in industry and academia. </p><p><a href="https://fosstodon.org/tags/CCHD2024" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CCHD2024</span></a> <a href="https://fosstodon.org/tags/BioNT" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BioNT</span></a> <a href="https://fosstodon.org/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a></p>
Heidi Seibold<p>Learned a lot today in <span class="h-card" translate="no"><a href="https://fosstodon.org/@yabellini" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>yabellini</span></a></span>'s keynote at <a href="https://fosstodon.org/tags/BioNTCCHD2024" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BioNTCCHD2024</span></a> about measuring success using both numbers and stories 💬 </p><p><a href="https://fosstodon.org/tags/CCHD2024" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CCHD2024</span></a> <a href="https://fosstodon.org/tags/BioNT" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BioNT</span></a> <a href="https://fosstodon.org/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a></p>
Heidi Seibold<p>Wonderful keynote from <span class="h-card" translate="no"><a href="https://scholar.social/@malvikasharan" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>malvikasharan</span></a></span> at <a href="https://fosstodon.org/tags/BioNTCCHD2024" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BioNTCCHD2024</span></a> about lessons learned in community management. </p><p>Slides: <a href="https://zenodo.org/records/14091819" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">zenodo.org/records/14091819</span><span class="invisible"></span></a></p><p><a href="https://fosstodon.org/tags/CCHD2024" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CCHD2024</span></a> <a href="https://fosstodon.org/tags/BioNT" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>BioNT</span></a> <a href="https://fosstodon.org/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a></p>
Joel Nitta<p>I'm very excited to become a <a href="https://fosstodon.org/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> Instructor Trainer! This is a key step for expanding The Carpentries in the country where I live, Japan. I look forward to growing the community here and globally!🔨 🌏 </p><p><a href="https://carpentries.org/blog/2024/10/announcing-instructor-trainers/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2024/10/a</span><span class="invisible">nnouncing-instructor-trainers/</span></a></p><p><span class="h-card" translate="no"><a href="https://hachyderm.io/@thecarpentries" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>thecarpentries</span></a></span></p>
Bioconductor<p>🎓 Exciting opportunity for <span class="h-card" translate="no"><a href="https://hachyderm.io/@thecarpentries" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>thecarpentries</span></a></span> Instructors!</p><p>We’re seeking instructors for the 2025 Bioconductor African Courses in Nairobi, Kenya, and West Africa. Teach R/Bioconductor or RNA-seq analysis to foster local capacity and collaboration.</p><p>✅ Carpentries certification required<br>🏫 One-week commitment<br>🧳 Travel &amp; accommodation covered</p><p>Interested? Complete our expression of interest form by Oct 21, 2024<br>➡️<a href="https://forms.gle/oHpbu2V9tzLukJ4j8" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="">forms.gle/oHpbu2V9tzLukJ4j8</span><span class="invisible"></span></a></p><p><a href="https://genomic.social/tags/Bioconductor" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioconductor</span></a> <a href="https://genomic.social/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://genomic.social/tags/CZIScience" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CZIScience</span></a> <a href="https://genomic.social/tags/Bioinformatics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Bioinformatics</span></a> <a href="https://genomic.social/tags/RStats" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>RStats</span></a></p>
The Carpentries<p>Last month we announced that HPC Carpentry, a project teaching high-performance computing skills, entered Lesson Program Incubation at The Carpentries. 🎉 </p><p>In today's blog post, <span class="h-card" translate="no"><a href="https://mastodon.cloud/@reid" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>reid</span></a></span> and <span class="h-card" translate="no"><a href="https://mathstodon.xyz/@tkphd" class="u-url mention" rel="nofollow noopener noreferrer" target="_blank">@<span>tkphd</span></a></span> from the HPC Carpentry steering committee, and Jane Herriman from the Lawrence Livermore National Laboratory (LLNL) report on teaching HPC Carpentry's full workflow workshop for the first time.</p><p>Find out more on how it went: <a href="https://carpentries.org/blog/2024/08/hpc-carpentry-llnl-workshop-report/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2024/08/h</span><span class="invisible">pc-carpentry-llnl-workshop-report/</span></a> </p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/HPCCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>HPCCarpentry</span></a></p>
The Carpentries<p>Yesterday we announced that as part of our ongoing journey towards consolidating our resources and three lesson programs (Data Carpentry, Software Carpentry, and Library Carpentry) under one, unified, identity as The Carpentries, most of the content on the three lesson programs' websites will now be accessed from the main Carpentries website. </p><p>For the full announcement, visit: <a href="https://carpentries.org/blog/2024/07/lesson-programs-websites-content-pared-down/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2024/07/l</span><span class="invisible">esson-programs-websites-content-pared-down/</span></a> </p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/DataCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>DataCarpentry</span></a> <a href="https://hachyderm.io/tags/SoftwareCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>SoftwareCarpentry</span></a> <a href="https://hachyderm.io/tags/LibraryCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>LibraryCarpentry</span></a></p>
The Carpentries<p>HPC Carpentry, a project teaching high-performance computing skills, has entered The Carpentries Lesson Program Incubation! This is another big step towards the project joining Data Carpentry, Library Carpentry and Software Carpentry as one of The Carpentries Lesson Programs! </p><p>Read more about this exciting development and and how you can get involved: <a href="https://carpentries.org/blog/2024/07/hpc-carpentry-incubation-announcement/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2024/07/h</span><span class="invisible">pc-carpentry-incubation-announcement/</span></a></p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/HPCCarpentry" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>HPCCarpentry</span></a></p>
The Carpentries<p>Yesterday we announced the adoption into the Data Carpentry Ecology curriculum a redesigned version of the "Data Analysis and Visualization in R for Ecologists" lesson! The new lesson lets learners dive into data visualisation much more quickly, letting learners quickly appreciate the benefits of the lesson before learning about data storage, manipulation and analysis as the lesson progresses.</p><p>To read more about this redesigned lesson: <a href="https://carpentries.org/blog/2024/07/dc-r-ecology-lesson-redesign-released/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2024/07/d</span><span class="invisible">c-r-ecology-lesson-redesign-released/</span></a></p><p><a href="https://hachyderm.io/tags/CarpentriesLessons" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentriesLessons</span></a> <a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a></p>
The Carpentries<p>Thanks to Dimitrios Theodorakis, Carpentries lessons can now be viewed in dark mode! Lessons will automatically display according to your browser's default settings and you can toggle between views using the menu in the upper right.</p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/CarpentriesLessons" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentriesLessons</span></a> <a href="https://hachyderm.io/tags/Accessibility" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Accessibility</span></a></p>
The Carpentries<p>Don’t miss your opportunity to become a leader in The Carpentries community by becoming an Instructor Trainer. Applications close by the end of today, Tuesday, Anywhere on Earth (AoE)! </p><p>Apply now! <a href="https://carpentries.org/blog/2024/05/trainer-training-application-open/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2024/05/t</span><span class="invisible">rainer-training-application-open/</span></a></p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/CarpentriesInstructorTrainers" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentriesInstructorTrainers</span></a> <a href="https://hachyderm.io/tags/CarpentriesCommunity" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentriesCommunity</span></a></p>
The Carpentries<p>The deadline to apply for The Carpentries Instructor Trainer Training program has been extended until Tuesday, June 18.</p><p>To learn more about the program and apply: <a href="https://carpentries.org/blog/2024/05/trainer-training-application-open/" rel="nofollow noopener noreferrer" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">carpentries.org/blog/2024/05/t</span><span class="invisible">rainer-training-application-open/</span></a></p><p><a href="https://hachyderm.io/tags/Carpentries" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>Carpentries</span></a> <a href="https://hachyderm.io/tags/CarpentriesInstructorTrainers" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>CarpentriesInstructorTrainers</span></a></p>